stereo.algorithm.cell_cell_communication.PlotCellCellCommunication.ccc_heatmap#
- PlotCellCellCommunication.ccc_heatmap(pvalue=0.05, separator_cluster='|', res_key='cell_cell_communication', width=None, height=None, palette='coolwarm', **kwargs)[source]#
Heatmap of number of interactions in each cluster pairs. Each off-diagonal cell value equals the number of interactions from A to B + the number of interactions from B to A
- Parameters:
pvalue (
float) – the threshold of pvalue, defaults to 0.05separator_cluster (
str) – the symbol for joining the first and second cluster in cluster pairs, defaults to ‘|’res_key (
str) – the key which specifies the cell cell communication result in data.tl.result, defaults to ‘cell_cell_communication’
- Returns:
_description_