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Installation
Usage Principles
Tutorials (Multi-sample)
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Tutorials
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- Basic Workflow
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- Data Preprocessing
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  - Gaussian Smoothing
  - scTransform
- Annotation
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  - SingleR
- Cell Analysis
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- Gene Analysis
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  - Spatial Hotspot
  - Gene Regulatory Network
- Cell Fate Inference
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  - Trajectory Analysis
  - RNA Velocity
- Image Processing
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- Interactive Visualization
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  - Interactive Cluster
  - High Resolution Matrix Export
- Performance Optimization
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  - Clustering by GPU
  - Performance
API
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Community
Contributing
Release Notes
References

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Versions: latest; v0.1

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Annotation#

This section introduces methods to annotate cells automatically, according to given reference.

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