stereo.plots.PlotCollection.hotspot_modules

PlotCollection.hotspot_modules(res_key='spatial_hotspot', ncols=2, dot_size=None, palette='stereo', width=None, height=None, title=None, vmin=None, vmax=None, **kwargs)[source]

Plot hotspot modules

Parameters:

  • res_key (str) – the result key of spatial hotspot.

  • ncols (Optional[int]) – the number of columns.

  • dot_size (Optional[int]) – the dot size.

  • palette (Optional[str]) – Color theme, defaults to 'CET_L4'.

  • width (Optional[str]) – the figure width in pixels.

  • height (Optional[str]) – the figure height in pixels.

  • out_path – the path to save the figure.

  • out_dpi – the dpi when the figure is saved.

  • title (Optional[str]) – the plot title.

  • vmin (Optional[float]) – The value representing the lower limit of the color scale. Values smaller than vmin are plotted with the same color as vmin.

  • vmax (Optional[float]) – The value representing the higher limit of the color scale. Values greater than vmax are plotted with the same color as vmax.