stereo.core.StPipeline.log1p

StPipeline.log1p(inplace=True, res_key='log1p')[source]

Transform the express matrix logarithmically.

Parameters:

  • inplace (bool) – whether to inplcae previous data or get a new express matrix after normalization of log1p.

  • res_key (str) – the key to get targeted result from self.result.

Returns:

  • An object of StereoExpData.

  • Depending on inplace, if True, the data will be replaced by those normalized.