stereo.plots.PlotCollection.batches_umap

PlotCollection.batches_umap(res_key, title='umap between batches', x_label='umap1', y_label='umap2', bfig_title='all batches', dot_size=1, colors='stereo_30', width=None, height=None)[source]

Plot batch umap

Parameters:

  • res_key (str) – the result key of UMAP.

  • title (Optional[str]) – the plot titles.

  • x_label (Optional[str]) – the x label.

  • y_label (Optional[str]) – the y label.

  • bfig_title (Optional[str]) – the big figure title.

  • dot_size (Optional[int]) – the dot size.

  • colors (Union[str, list, None]) – the color list.

  • width (Optional[int]) – the figure width in pixels.

  • height (Optional[int]) – the figure height in pixels.