Hide navigation sidebar

Hide table of contents sidebar

Skip to content

Toggle site navigation sidebar

Toggle table of contents sidebar

Installation
Usage Principles
Tutorials (Multi-sample)
Toggle navigation of Tutorials (Multi-sample)
Tutorials
Toggle navigation of Tutorials
- Basic Workflow
  Toggle navigation of Basic Workflow
- Data Preprocessing
  Toggle navigation of Data Preprocessing
  - Gaussian Smoothing
  - scTransform
- Annotation
  Toggle navigation of Annotation
  - SingleR
- Cell Analysis
  Toggle navigation of Cell Analysis
- Gene Analysis
  Toggle navigation of Gene Analysis
  - Spatial Hotspot
  - Gene Regulatory Network
- Cell Fate Inference
  Toggle navigation of Cell Fate Inference
- Image Processing
  Toggle navigation of Image Processing
- Interactive Visualization
  Toggle navigation of Interactive Visualization
  - High Resolution Matrix Export
- Performance Optimization
  Toggle navigation of Performance Optimization
  - Clustering by GPU
  - Performance
API
Toggle navigation of API
Community
Contributing
Release Notes
References

Toggle table of contents sidebar

stereo.algorithm.spa_track.SpaTrack.assess_start_cluster¶

SpaTrack.assess_start_cluster()[source]¶: Assess the entropy value to identify the starting cluster

stereo.algorithm.spa_track.SpaTrack.set_start_cells

stereo.algorithm.spa_track.SpaTrack.main

Copyright © 2023, BGI

Made with Sphinx and @pradyunsg's Furo

On this page

stereo.algorithm.spa_track.SpaTrack.assess_start_cluster
- SpaTrack.assess_start_cluster()